Finding finer functions for partially characterized proteins by protein-protein interaction networks

Based on high-throughput data, numerous algorithms have been designed to find functions of novel proteins. However, the effectiveness of such algorithms is currently limited by some fundamental factors, including (1) the low a-priori probability of novel proteins participating in a detailed function; (2) the huge false data present in high-throughput datasets; (3) the incomplete data coverage of functional classes; (4) the abundant but heterogeneous negative samples for training the algorithms; and (5) the lack of detailed functional knowledge for training algorithms. Here, for partially characterized proteins, we suggest an approach to finding their finer functions based on protein interaction sub-networks or gene expression patterns, defined in function-specific subspaces. The proposed approach can lessen the above-mentioned problems by properly defining the prediction range and functionally filtering the noisy data, and thus can efficiently find proteins’ novel functions. For thousands of yeast and human proteins partially characterized, it is able to reliably find their finer functions (e.g., the translational functions) with more than 90% precision. The predicted finer functions are highly valuable both for guiding the follow-up wet-lab validation and for providing the necessary data for training algorithms to learn other proteins.     

基于图书馆2．0环境下的馆员素质和技能要求探析

阐述了图书馆2．0的内涵，分别对一线馆员、咨询馆员、学科馆员应具备的服务素质和技能进行了探讨。     

钙调神经磷酸酶B亚基高表达条件及产业化研究

重组人CNB高表达大肠杆菌已由本室构建成功,摇瓶发酵液表达量可达100mg·L-1. 通过改进培养基配方及摇瓶表达工艺,使CNB在摇瓶发酵液中表达量达到500mg*L-1以上.在高表达量的基础上,又进行了产业化改进,以蒸馏水添加无机盐取代了原配方中的自来水,并提高了表达量.     

基因工程菌株EscherichiacoliC600（pRLK14）的流加培养

在１Ｌ搅拌发酵罐中对含有重组质粒ｐＲＬＫ１４的大肠杆菌进行了培养。结果表明，采用二段培养法，于３４℃增殖细菌，在对数增殖后期升温到４２℃进行诱导，可以高效表达基因产品半乳糖激酶。诱导期，醋酸浓度增长较快，模拟实验表明，控制醋酸浓度可进一步提高半乳糖缴酶产率。     

Mechanisms of sperm-egg interactions emerging from gene-manipulated animals

Untangling the molecular nature of sperm-egg interactions is fundamental if we are to understand fertilization. These phenomena have been studied for many years using biochemical approaches such as antibodies and ligands that interact with sperm or with eggs and their vestments. However, when homologous genetic recombination techniques were applied, most of the phenotypic factors of the gene-manipulated animals believed “essential” for fertilization were found to be dispensable. Of course, all biological systems contain redundancies and compensatory mechanisms, but as a whole the old model of fertilization clearly requires significant modification. In this review, we use the results of gene manipulation experiments in animals to propose the basis for a new vision. Received 26 January 2007; received after revision 7 March 2007; accepted 17 April 2007     

白血病小鼠模型中P53、C-myc基因表达的变化研究

探讨DNA、RNA病毒诱导小鼠发生白血病的机制。用单纯疱疹病毒Ⅱ型（HSV－2）和C型RNA病毒诱导70只昆明小鼠，光学显微镜检测HSV－2、C型病毒诱导发生白血病的成功率。正常对照组为30只昆明小鼠。免疫组化法检测HSV－2、C型病毒致瘤后P^53、G－myc基因表达的变化。70只昆明小鼠中有47只发生白血病，成功率为67．1％。47只白血病小鼠P^53、C－myc蛋白阳性表达率均比正常对照组高（P＜0．05）；23只未形成白血病的实验组小鼠P^53、C－myc蛋白阳笥表达率均与正常对照组无显差异（P＞0．05）。HSV－2、C型病毒可以通过调节P^53、C－myc基因的表达从而诱导小鼠白血病的发生。     

静电场中电势参考点的选择

要确定静电场中任一点的电势 ,必须先选择参考点 .文章讨论了静电场中关于电势参考点选择的若干问题 ,并阐明了电势参考点的选择理由及条件     

苏云金芽孢杆菌cry1基因的PCR-RFLP鉴定分析

利用PCR—RFLP技术对含有已知cry1基因的8株标准菌株和2株遗传工程菌进行了基因分析，证实了该方法的可行性．并在此基础上鉴定了分离保藏的70株B．t菌株的cry1型基因，结合SDS—PAGE分析以及室内生物测定结果，讨论了基因型与蛋白表达及毒力之间的关系．     

在胎儿发育过程中人MK基因的组织差异性表达

MK是肝素结合因子家族中的一个成员，用RT－PCR研究了第11－16周胎儿龄的胎儿的神经组织与非神经组织中MK基因的组织差异性表达，随着胎儿龄的增加，在神经组织中，MK呈现出规律性的从无互有和从低表达到高表达的趋势，提示它可能在胎儿脑的发育中起着重要的作用，在其他非神经组织中，尽管各组织中MK的表达呈现不同的规律，但看起来总的趋势是趋向活跃。     

非惯性系中变质量力学系统的变分原理及应用

利用附加惯性力的方法建立了非惯性系中变质量力学系统的Gauss变分原理,由此得到了非惯性系中变质量非完整系统运动方程的各种形式,最后提出了广义惯性力的广义非惯性势的概念并进一步给出上述方程的简化形式。